Water (H2O)

Water's Molecular Structure

- 2 hydrogens 1 oxygen
- Shared by covalent bonds
- V shaped

- Oxygen atoms, slight negative charge, meaning they are greedy for electrons.
- Hydrogen atoms,slight positive charge, meaning they want to give away their electrons.

Due to this polarity, all water molecules are attracted to one another and once they're all stuck together, those are called hydrogen bonds. The positive pole around one hydrogen atom will bond to the negative pole around the oxygen atoms of another water molecule.

Properties of Water

Cohesion -Water molecules are attracted to each other due to hydrogen bonding.
-Creating surface tension, allowing insects to walk on water.

Adhesion
-Water molecules stick to other polar or charged surfaces.
-Leads to capillary action, which helps water move through plant roots and blood vessels.

High Heat of Vaporization
-Takes lots of energy to convert water from liquid to gas.
-Sweating and transpiration help organisms cool down as water evaporates.

Universal Solvent
-Water dissolves polar and ionic compounds
-Important for transporting nutrients and chemical reactions in cells.

Proteins

Functions

Enzymatic Activity

- Proteins act as enzymes to speed up chemical reactions.
- Ex. Amylase breaks down starch into sugars.

Structural Support

Proteins like collagen and keratin provide strength and structure

Transport

Hemoglobin carries oxygen in red blood cells

Signaling

Hormones like insulin act as chemical messengers

Immune Defense

Antibodies are proteins that help protect against pathogens

Structure

Amino Acids (Building Blocks)

20 types of amino acids

Amino group (NH₂)

Carboxyl group (COOH)

R group (side chain, varies for each amino acid)

Peptide Bond

Levels of Protein Structure

Primary Structure

Sequence of amino acids (polypeptide chain)

Quaternary

Multiple polypeptide chains interacting

Tertiary Structure

3D folding due to interactions between R groups

Secondary Structure

Alpha helices or beta sheets formed by hydrogen bonding

Hydrophobicity
- Non-polar and repel water
- Hydrophobic molecules form separate layers rather than dissolving

Lipids

Types

Triglycerides (Fats & Oils)

- 1 glycerol + 3 fatty acids
- Long-term energy storage, insulation, protection

Saturated fats

No double bonds (solid at room temp)

Unsaturated fats

One or more double bonds (liquid at room temp

Phospholipids

- 1 glycerol + 2 fatty acids + phosphate group
- Form cell membranes (phospholipid bilayer)
- Hydrophilic head & Hydrophobic tail → Forms selective barrier

Steroids

- Four fused carbon rings
- Hormone signaling, cell membrane stability

Waxes

- Waterproofing

Functions

- Energy storage
- Cell membrane structure
- Insulation & Protection
- Hormone production
- Waterproofing

pH & Water (Acids, Bases, and Neutrality)

pH Scale (0-14)

Neutral (pH = 7): Pure water has equal amounts of H⁺ and OH⁻ ions.

Bases (pH > 7): High concentration of OH⁻ ions

Acids (pH < 7): High concentration of H⁺ ions

Water in Chemical Reactions

Hydrolysis
Water used to split large molecules into smaller ones.
Ex. Sucrose + H₂O → Glucose + Fructose

Nucleic Acids

Nucleic Acids

DNA (Deoxyribonucleic Acid)

- Stores genetic information
- Double-stranded (double helix)
- Bases: A-T, G-C

RNA (Ribonucleic Acid)

- Helps in protein synthesis
- Single-stranded
- Bases: A-U, G-C

Types:

mRNA→ Carries genetic code from DNA to ribosomes

rRNA → Forms part of ribosomes

tRNA → Brings amino acids to ribosomes

ATP (Adenosine Triphosphate)

- Energy carrier in cells
- High-energy phosphate bonds

Nucleotides

- Sugar (Deoxyribose in DNA, Ribose in RNA)
- Phosphate group
- Nitrogenous base (A, T/U, G, C)

Function

w

RNA: Helps build proteins

ATP: Provides energy for cellular activities

Dehydration Synthesis Water is removed to join two molecules together.
Ex.
Glucose + Glucose → Maltose + H₂O

Carboydrates

Types

Monosaccharides (Simple Sugars)

- Ex. Glucose, Fructose, Galactose
- Function: Quick energy source

Disaccharides (Two Monosaccharides Linked)

- Ex. Sucrose, Lactose, Maltose
- Formed by dehydration synthesis
- Broken down by hydrolysis

Polysaccharides (Complex Carbohydrates)

Storage Polysaccharides

- Starch (plants) → Stores glucose for energy
- Glycogen (animals) → Stored in liver & muscles

Structural Polysaccharides

- Cellulose (plant cell walls, indigestible to humans)
- Chitin (fungal cell walls, exoskeletons)

Functions

- Primary Energy Source
- Energy Storage
- Structural Support