Microorganisms in Terrestrial Ecosystem

Categories of Soil

mineral oil

contains less than 20% organic carbon

most of Earth's soils

organic soil

posesses at least 20% organic carbon

Soil Organic Matter (SOM)

retains nutrients

hold water (plant use)

maintains soil structure

Conditions affecting microbial populations

Surfaces

Water (-- moisture)

Thin water films-- oxygen at high level+easily replenish

Depends on

rainfall

particle size

drainage

temperature

varies depend on

depth

latitude & altitude

Acidity&Allkalinity

usually pH 4-8.5

influenced by

microbial metabolic activity

time of the year

climate

previous cropping hysory

Soil atmosphere

well drained soil-- well aerated

influenced by soil particle size

depth

Functional group of soil bacteria

Decomposers

Mutualists

Pathogens

Litotrophs or chemoautotrophs

Mycorrhizal associations

endomycorrhizae

fungi that enter the root hairs

ectomycorrhizae

fungi that reman extracellular, forming a sheath of interconnecting filaments around the root

Protozoa

functions

mineralizing nutrients

food source

the subsurface biosphere

subsurface zones

shallow subsurfaces

coal, kerogen, oil 7 gas containing region

methanogenic zones

make up one-third of biomass on Earth

C/N Ratios

stimulate growth

convert ammonium and nitrate to biomass

Nitrogen

nitrogen saturation point

point beyond which any nitrogen added to soil won't be incorporated into organic matter and will remain in mobile form

Microbial Loop

differs than in open ocean

plants rather than microbes account for most primary production

plants or insects released degradative enzymes do not rapidly diffuse away

Soil Population

Bacteria

Aerobic

Anaerobic

Filamentous

Microbe plants interactions

epiphytes

microbes live on the surface of plants

endophytes

microbes that colonize internal plant tissues

Roles of microbes in Rhizosphere & Rhizoplane

source of nutrients, creating microbial loop

synthesis & degradation of organic matter

promotion of plant growth

associative nitrogen fixation

Functions of soil fungi

Decomposers

Mutualists

Pathogens/parasites

Mycorrhizae

Ectomycorrhizae (ECM)

formed by ascomycete&basidomycete fungi

transfer essential nutrients (phosphorus/nitrigen) to roots

Arbuscular Mycorrhizae (AM)

transfer phosphorus to roots

provides ammonium to host

can increase plant's competiveness